miRBase entry: ggo-mir-411

Stem-loop ggo-mir-411

Accession

MI0020695

Description

Gorilla gorilla ggo-mir-411 precursor miRNA

Gene family

MIPF0000126; mir-379

Sequence

ucugugugguacuuggagagAUAGUAGACCGUAUAGCGUACGcuuuaucugugacguauguaacacgguccacuaacccucaguaucaaauccauccccgaggcuccugga
......(((((((..(((.(.((((.((((((...((((((((.........).)))))))...)))))).)))).).))))))))))..((((.((....))....))))

Structure

-----------------ucugug       ug   a A    A      AUA       - uuu 
                       ugguacu  gag g UAGU GACCGU   GCGUACG c   a
                       |||||||  ||| | |||| ||||||   ||||||| |   u
                       acuauga  cuc c auca cuggca   uguaugc g   c
agguccucggagccccuaccuaa       --   c a    c      caa       a ugu

Annotation confidence Not enough data

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Genome context

chr14: 85046651-85046761 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from ggo-mir-411

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-411

Accession	MIMAT0024148
Description	Gorilla gorilla ggo-miR-411 mature miRNA
Sequence	21 - AUAGUAGACCGUAUAGCGUACG - 42
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116