Stem-loop ggo-mir-299

Accession

MI0020689

Description

Gorilla gorilla ggo-mir-299 precursor miRNA

Gene family

MIPF0000186; mir-299

Literature search

1 open access papers mention ggo-mir-299
(18 sentences)

Sequence

ucgugcgguacuugaagaaaUGGUUUACCGUCCCACAUACAuuuugaauauguaugugggacgguaaaccgcuucuugguauccagcccagccauccaaaccucccuggag
..((..((((((..(((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))))))))..)).......((((........)))).

Structure

----------------------uc  gc      ug     a                      uu 
                        gu  gguacu  aagaa UGGUUUACCGUCCCACAUACAu  u
                        ||  ||||||  ||||| ||||||||||||||||||||||  g
                        cg  cuaugg  uucuu gccaaauggcaggguguaugua  a
gaggucccuccaaaccuaccgacc  ac      --     c                      ua 

Annotation confidence Not enough data

Genome context

chr14: 85047112-85047222 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ggo-mir-299

Mature ggo-miR-299

• Accession: MIMAT0024142
• Description: Gorilla gorilla ggo-miR-299 mature miRNA
• Sequence: 21 - UGGUUUACCGUCCCACAUACA - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116