Stem-loop ggo-mir-193b

Accession

MI0020685

Description

Gorilla gorilla ggo-mir-193b precursor miRNA

Gene family

MIPF0000082; mir-193

Sequence

ggagguuguggucucagaauCGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccaacuggcccucaaagucccgcuuuuggggucauucuggacagcgagggacucagg
.(((...((((((((((((.(((((((((((((((.((.((.((.........)).)).)).))))))))))))))).))))))))))))(((.(....).)))..)))...

Structure

--g   -------------guu            u               G  A  A  uua 
   gag                guggucucagaa CGGGGUUUUGAGGGC AG UG gu   u
   |||                |||||||||||| ||||||||||||||| || || ||   g
   cuc                uacugggguuuu gcccugaaacucccg uc ac ua   u
gga   agggagcgacaggucu            c               g  a  c  uuu 

Annotation confidence Not enough data

Genome context

chr16: 14794087-14794198 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-193b

Mature ggo-miR-193b

• Accession: MIMAT0024138
• Description: Gorilla gorilla ggo-miR-193b mature miRNA
• Sequence: 21 - CGGGGUUUUGAGGGCGAGAUGA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116