miRBase entry: ggo-mir-885

Stem-loop ggo-mir-885


Accession
MI0020661
Description
Gorilla gorilla ggo-mir-885 precursor miRNA
Gene family
MIPF0000532; mir-885


Sequence

cugcagaaggcccagucugcuacucggcccgcacucucuccauuacacuacccugccucuucuccaugagAGGCAGCGGGGUGUAGUGGAuagagcacggguucaagucc
..(((((........))))).(((.((((((..((((.(((((((((((.(((((((((((......))))))))).))))))))))))).))))..))))))..)))..

Structure
cugcagaaggcccagucugcu   -c      ca    c           a  -         cu 
                     acu  ggcccg  cucu uccauuacacu cc cugccucuu  c
                     |||  ||||||  |||| ||||||||||| || |||||||||   
                     uga  uugggc  gaga AGGUGAUGUGG GG GACGGAgag  c
-------------------cc   ac      ac    u           -  C         ua 


Annotation confidence Not enough data
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Genome context
chr3: 10654007-10654116 [-]

Database links

Mature ggo-miR-885

Accession MIMAT0024114
Description Gorilla gorilla ggo-miR-885 mature miRNA
Sequence 71 - AGGCAGCGGGGUGUAGUGGA - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116