miRBase entry: ggo-mir-30c

Stem-loop ggo-mir-30c


Accession
MI0020658
Description
Gorilla gorilla ggo-mir-30c precursor miRNA
Gene family
MIPF0000005; mir-30


Sequence

gagcacugagcgacagauacUGUAAACAUCCUACACUCUCAGCuguggaaaguaagaaagcugggagaaggcuguuuacucuuucugccuuggaagucaacuaaagagaaaug
((...(((((.(.((((....(((((((.(((...(((((((((..............))))))))).))).)))))))....))))))))))...))...............

Structure
---------------  gca     c a    uacU       U   ACA         guggaa 
               ga   cugag g caga    GUAAACA CCU   CUCUCAGCu      a
               ||   ||||| | ||||    ||||||| |||   |||||||||       
               cu   gguuc c gucu    cauuugu gga   gagggucga      g
guaaagagaaaucaa  gaa     - -    uucu       c   --a         aagaau 


Annotation confidence Not enough data
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Genome context
chr6: 73286638-73286750 [-]

Database links

Mature ggo-miR-30c

Accession MIMAT0024111
Description Gorilla gorilla ggo-miR-30c mature miRNA
Sequence 21 - UGUAAACAUCCUACACUCUCAGC - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116