Stem-loop ggo-mir-378a

Accession

MI0020650

Description

Gorilla gorilla ggo-mir-378a precursor miRNA

Gene family

MIPF0000168; mir-378

Sequence

augcagccagagggugacagagccacccagggcuccugacuccagguccuguguguuaccuagaaauagcACUGGACUUGGAGUCAGAAGGCCugaguggagucaccuuccc
.........(((((((((....((((.((((.((.((((((((((((((.((((..(........)..)))).)))))))))))))).)).)))).)))).)))))))))..

Structure

augcagcca         agag    c    g  c              u    gu acc 
         gagggugac    ccac cagg cu cugacuccaggucc gugu  u   u
         |||||||||    |||| |||| || |||||||||||||| ||||  |    
         cuuccacug    ggug guCC GA GACUGAGGUUCAGG CAcg  a   a
-------cc         ---a    a    G  A              U    au aag 

Annotation confidence Not enough data

Genome context

chr5: 133423980-133424091 [+]

Mature ggo-miR-378a

• Accession: MIMAT0024103
• Description: Gorilla gorilla ggo-miR-378a mature miRNA
• Sequence: 71 - ACUGGACUUGGAGUCAGAAGGCC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116