Stem-loop ggo-mir-485

Accession

MI0020649

Description

Gorilla gorilla ggo-mir-485 precursor miRNA

Gene family

MIPF0000201; mir-485

Sequence

uucaugugugguacuuggagAGAGGCUGGCCGUGAUGAAUucgauucaucaaagcgagucauacacggcucuccucucuuuuagugucaaauucugccucggagggcuu
........(((((((.(((((((((..(((((((((((.((((...........)))))))).)))))))..))))))))).)))))))......((((....))))..

Structure

------------uucaugug       u         CU       -    A    auuc 
                    ugguacu ggagAGAGG  GGCCGUG AUGA Uucg    a
                    ||||||| |||||||||  ||||||| |||| ||||    u
                    acuguga uuucucucc  ucggcac uacu gagc    c
uucgggaggcuccgucuuaa       u         uc       a    -    gaaa 

Annotation confidence Not enough data

Genome context

chr14: 85078439-85078547 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from ggo-mir-485

Mature ggo-miR-485

• Accession: MIMAT0024102
• Description: Gorilla gorilla ggo-miR-485 mature miRNA
• Sequence: 21 - AGAGGCUGGCCGUGAUGAAU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116