Stem-loop ggo-mir-342

Accession

MI0020648

Description

Gorilla gorilla ggo-mir-342 precursor miRNA

Gene family

MIPF0000190; mir-342

Sequence

gccaaccugugaaacugggcgcaaggugaggggugcuaucugugauugagggacaugguuaauggaauugUCUCACACAGAAAUCGCACCCGucaccuuggccuacuuauca
.........(((((.(((((.((((((((.((((((..((((((..(((((.((((.....)))....).)))))))))))....)))))).))))))))))))).)).)))

Structure

gccaaccug   -  c     g        g      --ua      au     g ----   g 
         uga aa ugggc caagguga gggugc    ucugug  ugagg a    cau g
         ||| || ||||| |||||||| ||||||    ||||||  ||||| |    ||| u
         acu uu auccg guuccacu CCCACG    AGACAC  ACUCU u    gua u
---------   a  c     -        G      CUAA      --     g uaag   a 

Annotation confidence Not enough data

Genome context

chr14: 84128574-84128685 [+]

Mature ggo-miR-342

• Accession: MIMAT0024101
• Description: Gorilla gorilla ggo-miR-342 mature miRNA
• Sequence: 71 - UCUCACACAGAAAUCGCACCCG - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116