Stem-loop ggo-mir-146b

Accession

MI0020643

Description

Gorilla gorilla ggo-mir-146b precursor miRNA

Gene family

MIPF0000103; mir-146

Sequence

gaacuuuggccaccuggcacUGAGAACUGAAUUCCAUAGGCUGUgagcucuagcaaugcccuguggacucaguucuggugcccggcagugcuacaacaucaaugccaagg
...(((((((..((.((((((.((((((((..(((((((((..((........))..).)))))))).)))))))))))))).))..((......))......)))))))

Structure

gaa       ----------------ca  u      G        AU        - UG  agc 
   cuuuggc                  cc ggcacU AGAACUGA  UCCAUAGG C  Ug   u
   |||||||                  || |||||| ||||||||  |||||||| |  ||    
   ggaaccg                  gg ccgugg ucuugacu  aggugucc g  ac   c
---       uaacuacaacaucgugac  c      -        -c        c ua  gau 

Annotation confidence Not enough data

Genome context

chr10: 117112453-117112562 [+]

Mature ggo-miR-146b

• Accession: MIMAT0024096
• Description: Gorilla gorilla ggo-miR-146b mature miRNA
• Sequence: 21 - UGAGAACUGAAUUCCAUAGGCUGU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116