miRBase entry: ggo-mir-127

Stem-loop ggo-mir-127


Accession
MI0020641
Description
Gorilla gorilla ggo-mir-127 precursor miRNA
Gene family
MIPF0000080; mir-127

Literature search
1 open access papers mention ggo-mir-127
(1 sentences)

Sequence

guaaaaggucucgcugugaucacugucuccagccugcugaagcucagagggcucugauucagaaagaucaUCGGAUCCGUCUGAGCUUGGCuggucggaagucucaucauc
......((((.......))))......(((.(((.(((.(((((((((.((.((((((((.....))..)))))).)).)))))))))))).))).)))............

Structure
guaaaaggucucgcugugaucacuguc   a   u   g         g  c      --  a 
                           ucc gcc gcu aagcucaga gg ucugau  uc g
                           ||| ||| ||| ||||||||| || ||||||  || a
                           agg ugg CGG UUCGAGUCU CC AGGCUa  ag a
---------------cuacuacucuga   c   u   -         G  U      cu  a 


Annotation confidence Not enough data
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Genome context
chr14: 84900208-84900318 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ggo-mir-127
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-127

Accession MIMAT0024094
Description Gorilla gorilla ggo-miR-127 mature miRNA
Sequence 71 - UCGGAUCCGUCUGAGCUUGGC - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116