miRBase entry: ggo-mir-598

Stem-loop ggo-mir-598


Accession
MI0020636
Description
Gorilla gorilla ggo-mir-598 precursor miRNA
Gene family
MIPF0000393; mir-598


Sequence

caggaagauggcuugaugaugcugcugaugcuggcggugaucccgauggugugagcuggaaauggggugcUACGUCAUCGUUGUCAUCGUCAucaucaucauccgagcagcc
..........(((((((((......(((((.((((((((((..((((((((((.(((........)))..))))))))))..)))))))))).))))))))).)))))....

Structure
caggaagaug     -    ugcugc     c          cc          -a   gga 
          gcuug auga      ugaug uggcggugau  cgauggugug  gcu   a
          ||||| ||||      ||||| ||||||||||  ||||||||||  |||    
          cgagc uacu      acuac ACUGCUACUG  GCUACUGCAU  ugg   a
------ccga     c    ------     u          UU          cg   ggu 


Annotation confidence Not enough data
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Genome context
chr8: 10200243-10200354 [-]

Database links

Mature ggo-miR-598

Accession MIMAT0024089
Description Gorilla gorilla ggo-miR-598 mature miRNA
Sequence 71 - UACGUCAUCGUUGUCAUCGUCA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116