miRBase entry: ggo-mir-140

Stem-loop ggo-mir-140


Accession
MI0020628
Description
Gorilla gorilla ggo-mir-140 precursor miRNA
Gene family
MIPF0000085; mir-140


Sequence

gcccugugugugucucucucuguguccugccagugguuuuacccuaugguagguuacgucaugcuguucuACCACAGGGUAGAACCACGGACaggauaccggggcacccu
((((((...............((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).)))))))))))))).....

Structure
-----      ugugugucucucucu        -  a             a       u  c  c 
     gcccug               guguccug cc gugguuuuacccu ugguagg ua gu  
     ||||||               |||||||| || ||||||||||||| ||||||| || || a
     cggggc               cauaggaC GG CACCAAGAUGGGA ACCAucu gu cg  
uccca      ---------------        A  -             C       u  -  u 


Annotation confidence Not enough data
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Genome context
chr16: 60962926-60963035 [+]

Database links

Mature ggo-miR-140

Accession MIMAT0024081
Description Gorilla gorilla ggo-miR-140 mature miRNA
Sequence 71 - ACCACAGGGUAGAACCACGGAC - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116