Stem-loop ptr-mir-23c

Accession

MI0020595

Description

Pan troglodytes ptr-mir-23c precursor miRNA

Gene family

MIPF0001429; mir-23c

Sequence

auugagugacuuuccaggugucacacagugaguggcauaaucagaguacaauuugagucaugcccauacAUCACAUUGCCAGUGAUUACCCaaggaaagugacguacaugu
.....((.(((((((.((((((((.(((((((((((((..(((((......)))))...)))))...)).))))..))...)))).))))...))))))).))........

Structure

---auuga  g       --a    -    --a  --    -  ---     -aa     gu 
        gu acuuucc   ggug ucac   ca  guga gu   ggcau   ucaga  a
        || |||||||   |||| ||||   ||  |||| ||   |||||   |||||   
        ca ugaaagg   CCAU AGUG   GU  CACU ca   ccgua   aguuu  c
uguacaug  g       aaC    U    ACC  UA    A  uac     cug     aa 

Annotation confidence Not enough data

Genome context

chrX: 20065398-20065508 [-]

Mature ptr-miR-23c

• Accession: MIMAT0024048
• Description: Pan troglodytes ptr-miR-23c mature miRNA
• Sequence: 70 - AUCACAUUGCCAGUGAUUACCC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116