Stem-loop cgr-mir-26b

Accession

MI0020472

Description

Cricetulus griseus cgr-mir-26b precursor miRNA

Gene family

MIPF0000043; mir-26

Sequence

17831 reads, 259 reads per million, 6 experiments

gggacccagUUCAAGUAAUUCAGGAUAGGUUguggugcuggccagCCUGUUCUCCAUUACUUGGCUCgggggccggu
((..((((((.((((((((..(((((((((..((((....)))))))))))))..))))))))))).)))..))...

Structure

---  ga   -   U        UC         Ug    g 
   gg  ccc agU CAAGUAAU  AGGAUAGGU  uggu c
   ||  ||| ||| ||||||||  |||||||||  ||||  
   cc  ggg UCG GUUCAUUA  UCUUGUCCg  accg u
ugg  gg   C   -        CC         --    g 

Annotation confidence Low

Genome context

JH002214.1: 192684-192760 [+]

Mature cgr-miR-26b-5p

• Accession: MIMAT0023872
• Description: Cricetulus griseus cgr-miR-26b-5p mature miRNA
• Sequence: 10 - UUCAAGUAAUUCAGGAUAGGUU - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-26b-3p

• Accession: MIMAT0023873
• Description: Cricetulus griseus cgr-miR-26b-3p mature miRNA
• Sequence: 46 - CCUGUUCUCCAUUACUUGGCUC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75