miRBase entry: cgr-mir-210

Stem-loop cgr-mir-210


Accession
MI0020458
Description
Cricetulus griseus cgr-mir-210 precursor miRNA
Gene family
MIPF0000086; mir-210


Sequence

22238 reads, 292 reads per million, 6 experiments
ggcucaggacAGCCACUGCCCACCGCACACUGcguugcuccggacccaCUGUGCGUGUGACAGCGGCUGAucugucccu
((..((((.(((((.(((..(((((((((.((.(((......))).)).)))))).))).))).))))).))))..)).

Structure
-  cu    a     A   CC   -      C  c   gc 
 gg  cagg cAGCC CUG  CAC CGCACA UG guu  u
 ||  |||| ||||| |||  ||| |||||| || |||   
 cc  gucu GUCGG GAC  GUG GCGUGU ac cag  c
u  cu    A     C   -A   U      C  c   gc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH001184.1: 77044-77122 [-]

Database links

Mature cgr-miR-210-5p

Accession MIMAT0023848
Description Cricetulus griseus cgr-miR-210-5p mature miRNA
Sequence 11 - AGCCACUGCCCACCGCACACUG - 32
Evidence experimental
Illumina [1]

Mature cgr-miR-210-3p

Accession MIMAT0023849
Description Cricetulus griseus cgr-miR-210-3p mature miRNA
Sequence 49 - CUGUGCGUGUGACAGCGGCUGA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75