miRBase entry: cgr-mir-206

Stem-loop cgr-mir-206


Accession
MI0020456
Description
Cricetulus griseus cgr-mir-206 precursor miRNA
Gene family
MIPF0000038; mir-1

Literature search
2 open access papers mention cgr-mir-206
(5 sentences)

Sequence

6698 reads, 82 reads per million, 6 experiments
uucccgaggccacaugcuucuuuauauccgcauagauaucacugcacuaUGGAAUGUAAGGAAGUGUGUGGuuuuggcaa
...((((((((((((((((((((((((.(.(((((...........)))))).))))))))))))))))))))))))...

Structure
uuc                        c g     auau 
   ccgaggccacaugcuucuuuauau c cauag    c
   |||||||||||||||||||||||| | |||||    a
   gguuuuGGUGUGUGAAGGAAUGUA G GUauc    c
aac                        A -     acgu 


Annotation confidence Not enough data
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Genome context
JH001075.1: 474490-474569 [-]

Database links

Mature cgr-miR-206

Accession MIMAT0023846
Description Cricetulus griseus cgr-miR-206 mature miRNA
Sequence 50 - UGGAAUGUAAGGAAGUGUGUGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75