miRBase entry: cgr-mir-205

Stem-loop cgr-mir-205


Accession
MI0020455
Description
Cricetulus griseus cgr-mir-205 precursor miRNA
Gene family
MIPF0000058; mir-205


Sequence

14516 reads, 115 reads per million, 6 experiments
gauccucuugUCCUUCAUUCCACCGGAGUcugucuuaugccaaccagauuucaguggagugaagcucaggaggcauggag
...(((((((..(((((((((((.((((((((............)))))))).)))))))))))..))))))).......

Structure
----gau       UC           C        ucuua 
       ccucuug  CUUCAUUCCAC GGAGUcug     u
       |||||||  ||||||||||| ||||||||      
       ggaggac  gaagugaggug cuuuagac     g
gagguac       uc           a        caacc 


Annotation confidence Not enough data
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Genome context
JH000117.1: 1381123-1381202 [-]

Database links

Mature cgr-miR-205

Accession MIMAT0023845
Description Cricetulus griseus cgr-miR-205 mature miRNA
Sequence 11 - UCCUUCAUUCCACCGGAGU - 29
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75