Stem-loop cgr-mir-137

Accession

MI0020399

Description

Cricetulus griseus cgr-mir-137 precursor miRNA

Gene family

MIPF0000106; mir-137

Literature search

1 open access papers mention cgr-mir-137
(2 sentences)

Sequence

12464 reads, 209 reads per million, 6 experiments

cucuucggugACGGGUAUUCUUGGGUGGAUAAUacggauuacguugUUAUUGCUUAAGAAUACGCGUAGucgaggaga
((((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..)))))))).

Structure

-        ug   G             G      -  g 
 cucuucgg  ACG GUAUUCUUGGGUG AUAAUa cg a
 ||||||||  ||| ||||||||||||| |||||| || u
 gaggagcu  UGC CAUAAGAAUUCGU UAUUgu gc u
a        GA   G             -      u  a 

Annotation confidence Not enough data

Genome context

JH002736.1: 64351-64428 [-]

Mature cgr-miR-137-5p

• Accession: MIMAT0023762
• Description: Cricetulus griseus cgr-miR-137-5p mature miRNA
• Sequence: 11 - ACGGGUAUUCUUGGGUGGAUAAU - 33
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-137-3p

• Accession: MIMAT0023763
• Description: Cricetulus griseus cgr-miR-137-3p mature miRNA
• Sequence: 47 - UUAUUGCUUAAGAAUACGCGUAG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75