Stem-loop sequence hsa-mir-6077

Accession

MI0020354 (change log)

Previous IDs

hsa-mir-6077-1

Symbol

HGNC:MIR6077

Description

Homo sapiens miR-6077 stem-loop

Stem-loop

   -c   c u     -   aa    u  a       c    uagu 
5'   cug g agaaa ggg  gagc gu cggccuu gcgc    u
     ||| | ||||| |||  |||| || ||||||| ||||     
3'   gac c ucuuu ucc  cucg ca gucggaa ugug    u
   gu   u c     a   --    -  -       u    uuug 

Deep sequencing

9 reads, 0 reads per million, 8 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr1: 148388282-148388363 [+]
• Overlapping transcripts:

  intergenic

Database links

• HGNC:MIR6077
• miRBase Tracker:MI0020354

Mature sequence hsa-miR-6077

• Accession: MIMAT0023702
• Sequence: 13 - gggaagagcuguacggccuuc - 33
• Deep sequencing: 7 reads, 7 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6077
  • miRDB:hsa-miR-6077

References

1. PMID:22282338 "Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs" Voellenkle C, Rooij Jv, Guffanti A, Brini E, Fasanaro P, Isaia E, Croft L, David M, Capogrossi MC, Moles A, Felsani A, Martelli F RNA. 18:472-484(2012).