Stem-loop rno-mir-1199

Accession

MI0020343

Description

Rattus norvegicus rno-mir-1199 precursor miRNA

Gene family

MIPF0001659; mir-1199

Sequence

agccugcgccggagccgcggUCUGAGUCCGGGUCGCGCGGgagaggaacucaucgaguugcgggUGCGGCCGGUGCUCAGCCGGCcagguuccgguaucccgcugccgcgcgcccuggag
...((((((....).)))))......((((((.(((((((.((.(((((((...)))))((.((.(((((((((.....)))))))..)).)).))...)).)).))))))).)))))).

Structure

agccugcgccggagccgcggUCUGAG      U       g  a  aacucaucgaguu  g  U  --       G 
                          UCCGGG CGCGCGG ag gg             gc gg GC  GGCCGGU C
                          |||||| ||||||| || ||             || || ||  ||||||| U
                          aggucc gcgcgcc uc cc             ug cc ug  cCGGCCG C
-------------------------g      c       g  g  ----------cua  g  u  ga       A 

Annotation confidence Not enough data

Genome context

chr19: 25133394-25133513 [-]

Mature rno-miR-1199-5p

• Accession: MIMAT0031125
• Description: Rattus norvegicus rno-miR-1199-5p mature miRNA
• Sequence: 21 - UCUGAGUCCGGGUCGCGCGG - 40
• Evidence: not_experimental

Mature rno-miR-1199-3p

• Accession: MIMAT0031126
• Description: Rattus norvegicus rno-miR-1199-3p mature miRNA
• Sequence: 65 - UGCGGCCGGUGCUCAGCCGGC - 85
• Evidence: not_experimental

References

1. PubMed ID: 23229173
   Human hepatocellular carcinoma cell-specific miRNAs reveal the differential expression of miR-24 and miR-27a in cirrhotic/non-cirrhotic HCC
   Salvi A, Abeni E, Portolani N, Barlati S, De Petro G
   Int J Oncol (2013) 42:391-402