miRBase entry: ame-mir-6053

Stem-loop ame-mir-6053


Accession
MI0020324
Description
Apis mellifera ame-mir-6053 precursor miRNA


Sequence

aaucgucucaAUACGAAAGACCGCGCGGAUGUgucguuagugugcacguguucuuuacgcucgcgcaguguuucguaaagagaagagg
..((.((((..(((((((.((.((((((..(((((......).))))((((.....)))))))))).)).)))))))..)))).))..

Structure
aa  g    aA       G  C      -----------AU    - gu 
  uc ucuc  UACGAAA AC GCGCGG             GUgu c  u
  || ||||  ||||||| || ||||||             |||| |   
  ag agag  augcuuu ug cgcgcu             cacg g  a
gg  a    aa       g  a      cgcauuucuugug    u ug 


Annotation confidence Not enough data
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Genome context
CM000054.5: 26573156-26573243 [+]

Database links

Mature ame-miR-6053-5p

Accession MIMAT0023677
Description Apis mellifera ame-miR-6053-5p mature miRNA
Sequence 11 - AUACGAAAGACCGCGCGGAUGU - 32
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 22458842
    Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
    "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
    "Insect Mol Biol (2012) 21:297-303

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226