miRBase entry: bna-MIR156f

Stem-loop bna-MIR156f


Accession
MI0020262
Description
Brassica napus bna-MIR156f precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
13 open access papers mention bna-MIR156f
(210 sentences)

Sequence

cacacagaaauUGACAGAAGAGAGUGAGCACacaaaaguaaauugcauauguugcauuugcuucucuugcgugcucacugcucuuucugucagauucccgugcugaucuc
(((((.(((.(((((((((((((((((((((.(((((((((((.(((.....)))))))))))...))).))))))))).))).))))))))).)))..))).)).....

Structure
-----  -   -a   a         -   -         a   ---        u   u 
     ca cac  gaa uUGACAGAA GAG AGUGAGCAC caa   aaguaaau gca a
     || |||  ||| ||||||||| ||| ||||||||| |||   |||||||| ||| u
     gu gug  cuu gacugucuu cuc ucacucgug guu   uucguuua cgu g
cucua  c   cc   a         u   g         c   cuc        -   u 


Annotation confidence Not enough data
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Genome context
EM:CV432746: 228-337 [+]

Database links

Mature bna-miR156f

Accession MIMAT0023615
Description Brassica napus bna-miR156f mature miRNA
Sequence 12 - UGACAGAAGAGAGUGAGCAC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138974
    Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
    "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
    "Plant Physiol (2012) 158:813-823