Stem-loop sequence sly-MIR6027

AccessionMI0020258 (change log)
DescriptionSolanum lycopersicum miR6027 stem-loop
Gene family MIPF0001424; MIR6027
Literature search

11 open access papers mention sly-MIR6027
(22 sentences)

Stem-loop 
   ---uuu    a   u                 ac       a   u      g       auaugcaaagaagauggagauu 
5'       cgua uuu acaugauuauggguagc  aaggauu aug gaaaca aaaagug                      c
         |||| ||| |||||||||||||||||  ||||||| ||| |||||| |||||||                      a
3'       guau aag uguacuaauaccuaucg  uuccuaa ugc cuuugu uuuucac                      a
   uuuauu    -   u                 gc       g   u      g       aaaaaaagcauuguuauuuguu
Get sequence
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Database links

Mature sequence sly-miR6027-5p

Accession MIMAT0032133
Sequence

21 -  

auggguagcacaaggauuaaug

 - 42

Get sequence
Evidence experimental; Illumina [2]

Mature sequence sly-miR6027-3p

Accession MIMAT0023611
Previous IDssly-miR6027
Sequence

122 -  

ugaauccuucggcuauccauaa

 - 143

Get sequence
Evidence experimental; Illumina [2]

References

1
PMID:22307647 "MicroRNA regulation of plant innate immune receptors" Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B Proc Natl Acad Sci U S A. 109:1790-1795(2012).
2
PMID:24376253 "Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant" Kravchik M, Sunkar R, Damodharan S, Stav R, Zohar M, Isaacson T, Arazi T J Exp Bot. 65:725-739(2014).