miRBase entry: nta-MIR6020b

Stem-loop nta-MIR6020b


Accession
MI0020235
Description
Nicotiana tabacum nta-MIR6020b precursor miRNA
Gene family
MIPF0001610; MIR6020


Sequence

ucccuaugcagcugacuuguAAAUGUUCUUCGAGUAUCUUCauucuuccuuaauccuaaugaaguuuuagaggcgaagauacucgaaaaacauuuacuuguuauuuguauagaauua
...((((((((.((((..(((((((((.(((((((((((((...((((..(((..((.....))..))))))).))))))))))))).)))))))))..)))).)))))))).....

Structure
--ucc        c    uu         C             auu    cu   uc  a 
     cuaugcag ugac  guAAAUGUU UUCGAGUAUCUUC   cuuc  uaa  cu a
     |||||||| ||||  ||||||||| |||||||||||||   ||||  |||  || u
     gauauguu auug  cauuuacaa aagcucauagaag   ggag  auu  ga g
auuaa        u    uu         a             --c    --   uu  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6020b

Accession MIMAT0023587
Description Nicotiana tabacum nta-miR6020b mature miRNA
Sequence 21 - AAAUGUUCUUCGAGUAUCUUC - 41
Evidence not_experimental

References

  1. PubMed ID: 22307647
    MicroRNA regulation of plant innate immune receptors
    "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
    "Proc Natl Acad Sci U S A (2012) 109:1790-1795