Stem-loop dpr-MIR396

Accession

MI0020207

Description

Digitalis purpurea dpr-MIR396 precursor miRNA

Gene family

MIPF0000047; MIR396

Literature search

1 open access papers mention dpr-MIR396
(6 sentences)

Sequence

acucuucuuauuuUUCCACAGCUUUCUUGAACUGcagaucaucguaucggaguaaacuggagaugacgcgguucagugaagcugugggagauaaugagaggguc
..(((((((((((((((((((((((.(((((((((.(.(((((...((((......)))).))))))))))))))).))))))))))))))..)))))))))..

Structure

ac         --              C         a a     gua    ag 
  ucuucuuau  uuUUCCACAGCUUU UUGAACUGc g ucauc   ucgg  u
  |||||||||  |||||||||||||| ||||||||| | |||||   ||||   
  gggagagua  agagggugucgaag gacuuggcg c aguag   gguc  a
cu         au              u         - -     --a    aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature dpr-miR396

• Accession: MIMAT0023536
• Description: Digitalis purpurea dpr-miR396 mature miRNA
• Sequence: 14 - UUCCACAGCUUUCUUGAACUG - 34
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 22233149
   Comprehensive transcriptome analysis reveals novel genes involved in cardiac glycoside biosynthesis and mlncRNAs associated with secondary metabolism and stress response in Digitalis purpurea
   Wu B, Li Y, Yan H, Ma Y, Luo H, Yuan L, Chen S, Lu S
   BMC Genomics (2012) 13:15