Accession
MI0020192
Description
Arabidopsis thaliana
ath-MIR5998a precursor miRNA
Gene family
MIPF0001613;
MIR5998
Sequence
ugaacuuaaggagaaaacaaauuggaACAGUUUGUGUUUUGUUUUGUguuuuguuggauucguuacucuccaccgucgccgccauguacaauucucaaacucugacuucuuggaggcaauucuuccaauuuguuccaacaucacaaaacaaaacacaaacuguuccaauuuguuuucucacaaaaugagaaguugac
..(((((...((((((((((((((((((((((((((((((((((((((...(((((((...((.((........)).))...............(((.....)))....(((((((.....))))))).....))))))).))))))))))))))))))))))))))))))))))))))..........)))))...
..(((((...((((((((((((((((((((((((((((((((((((((...(((((((...((.((........)).))...............(((.....)))....(((((((.....))))))).....))))))).))))))))))))))))))))))))))))))))))))))..........)))))...
Structure
-ug -------aag uuu uucguuacucuccaccgucgccgccauguacaauucucaaacucugacuuc c aacuu gagaaaacaaauuggaACAGUUUGUGUUUUGUUUUGUg uguugga uuggagg a ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| a uugaa cucuuuuguuuaaccuugucaaacacaaaacaaaacac acaaccu aaccuuc u cag gaguaaaaca --u ----------------------------------------------uguuu u
Annotation confidence
Not enough data
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Genome context
chr5: 3247236-3247432 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ath-MIR5998a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR5998a
| Accession | MIMAT0023521 |
| Description | Arabidopsis thaliana ath-miR5998a mature miRNA |
| Sequence | 27 - ACAGUUUGUGUUUUGUUUUGU - 47 |
| Evidence |
experimental
Illumina [1] |
References
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