Stem-loop hco-mir-5918a

Accession

MI0020063

Description

Haemonchus contortus hco-mir-5918a precursor miRNA

Gene family

MIPF0001395; mir-5918

Sequence

ucccucgcugaugggauaacggguagcacgauaggaagacaagcuguugcgcaggcUAGUCUCCUCGAUCGUGUUACCCAaugucucaucgcugcugaaccg
......((.(((((((((..((((((((((((((((.(((.((((........)))).)))))))..))))))))))))..)))))))))))..........

Structure

----ucccuc  u         ac            --    a   a    guu 
          gc gaugggaua  ggguagcacgau  agga gac agcu   g
          || |||||||||  ||||||||||||  |||| ||| ||||    
          cg cuacucugu  CCCAUUGUGCUA  UCCU CUG Ucgg   c
gccaagucgu  -         aA            GC    -   A    acg 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5918a

• Accession: MIMAT0023391
• Description: Haemonchus contortus hco-miR-5918a mature miRNA
• Sequence: 57 - UAGUCUCCUCGAUCGUGUUACCCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4