Stem-loop hco-mir-277

Accession

MI0020049

Description

Haemonchus contortus hco-mir-277 precursor miRNA

Sequence

auguggcaguucugccggucugcauaccaguggcagcauuuccacgcgauuugguugAAAAUGCACCUACCUGGUAUGCAgaccaugucugcgucucggccguu
....((((....))))(((((((((((((((((..((((((.((.((......)))).))))))..))).))))))))))))))......((......))....

Structure

----auguggcaguucugcc              -   ca      c  c  ga 
                    ggucugcauaccag ugg  gcauuu ca gc  u
                    |||||||||||||| |||  |||||| || ||   
                    ccagACGUAUGGUC AUC  CGUAAA gu ug  u
uugccggcucugcgucugua              C   CA      A  -  gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-277

• Accession: MIMAT0023377
• Description: Haemonchus contortus hco-miR-277 mature miRNA
• Sequence: 58 - AAAAUGCACCUACCUGGUAUGCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4