Stem-loop hco-mir-790

Accession

MI0020046

Description

Haemonchus contortus hco-mir-790 precursor miRNA

Sequence

gcuaugacggCUUGGCACUCGAGAACGACUGCGcagaugacgcagcgaucgacggugccaaaccaacggcucgcca
(((..(..((.(((((((.((.((.((.((((((....).))))))).))..))))))))).))..))))......

Structure

------   au ac  C       U  -A  A  A     - a 
      gcu  g  gg UUGGCAC CG  GA CG CUGCG c g
      |||  |  || ||||||| ||  || || ||||| |  
      cgg  c  cc aaccgug gc  cu gc gacgc g a
accgcu   -- aa  a       -  ag  a  -     a u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-790

• Accession: MIMAT0023374
• Description: Haemonchus contortus hco-miR-790 mature miRNA
• Sequence: 11 - CUUGGCACUCGAGAACGACUGCG - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4