Stem-loop hco-mir-5891

Accession

MI0020004

Description

Haemonchus contortus hco-mir-5891 precursor miRNA

Sequence

guauauagaaucuuuaccgcagAUAGCGAUAUCCUCUGAAUGGUgagugggauucaccauuuagaggauaucgcuguccgcgauaacggauucacgagaaaauguuccau
.......(((((((((.(((.(((((((((((((((((((((((((((...))))))))))))))))))))))))))).))).))).)))))).................

Structure

----------guauaua      -   c   a                           g 
                 gaaucu uua cgc gAUAGCGAUAUCCUCUGAAUGGUgagu  
                 |||||| ||| ||| ||||||||||||||||||||||||||| g
                 cuuagg aau gcg cugucgcuauaggagauuuaccacuua  
uaccuuguaaaagagca      c   a   c                           g 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5891

• Accession: MIMAT0023328
• Description: Haemonchus contortus hco-miR-5891 mature miRNA
• Sequence: 23 - AUAGCGAUAUCCUCUGAAUGGU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4