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miRBase |
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Stem-loop sequence osa-MIR5827 |
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Accession | MI0019846 (change log) | ||||
Description | Oryza sativa miR5827 stem-loop | ||||
Literature search |
1 open access papers mention osa-MIR5827 | ||||
Stem-loop |
cac a cua - a uc a -caauu agcccaccggugaacuccuccaccucu 5' uauuuu cuuuguugca uuuggacuacc aac c cuucu agc cau cc u |||||| |||||||||| ||||||||||| ||| | ||||| ||| ||| || 3' auaaaa gaaacaacgu aaaccuggugg uug g gaagg ucg gua gg u aau g -ag a a ga - cagacc agaggaggucguuucuauacuuagacg |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence osa-miR5827 |
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Accession | MIMAT0023301 |
Sequence |
11 - uuuguugcaauuuggacuacc - 31 |
Deep sequencing | 5 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"
Plant Cell. 23:4185-4207(2011).
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