miRBase entry: gma-MIR2111b

Stem-loop gma-MIR2111b


Accession
MI0019765
Description
Glycine max gma-MIR2111b precursor miRNA
Gene family
MIPF0000754; MIR2111

Literature search
6 open access papers mention gma-MIR2111b
(31 sentences)

Sequence

uaggaucaggUAAUCUGCAUCCUGAGGUUUAgaaacaauauguuuaucgggucuaauccuugggauguagauuaccacguccuu
.(((((..(((((((((((((((((((.(((((..(.(((....))).)..))))).)))))))))))))))))))..))))).

Structure
u     ca                   U     aa a   u 
 aggau  ggUAAUCUGCAUCCUGAGG UUAga  c aua g
 |||||  ||||||||||||||||||| |||||  | |||  
 uccug  ccauuagauguaggguucc aaucu  g uau u
u     ca                   u     gg c   u 


Annotation confidence Not enough data
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Genome context
chr18: 45662001-45662084 [-]

Database links

Mature gma-miR2111b

Accession MIMAT0023220
Description Glycine max gma-miR2111b mature miRNA
Sequence 11 - UAAUCUGCAUCCUGAGGUUUA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553