Stem-loop gma-MIR5785

Accession

MI0019736

Description

Glycine max gma-MIR5785 precursor miRNA

Sequence

auuuacuuguUAGUGUUGUCCUGUCGAACACGGAcaccaacaugugucagacaccagacacgaacaaaagaauggaguguacgugauugauagguucucacuucuguagaauaucuauuuuuacuuucaugcaacguggaua
((((((((((.((((....((((((((.((((.((((...((((((((........)))))..........)))..)))).)))).))))))))....))))...((((((.......))))))......)))).)))))).

Structure

-      -    ---------------------------U    UUGU        A    G    caa   ----------     aga 
 auuuac uugu                            AGUG    CCUGUCGA CACG Acac   cau          guguc   c
 |||||| ||||                            ||||    |||||||| |||| ||||   |||          |||||    
 uaggug aacg                            ucac    ggauaguu gugc ugug   gua          cacag   a
a      c    uacuuucauuuuuaucuauaagaugucu    ucuu        a    a    -ag   agaaaacaag     acc 

Annotation confidence Not enough data

Genome context

chr8: 45205542-45205683 [-]

Mature gma-miR5785

• Accession: MIMAT0023191
• Description: Glycine max gma-miR5785 mature miRNA
• Sequence: 11 - UAGUGUUGUCCUGUCGAACACGGA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553