miRBase entry: gma-MIR5761b

Stem-loop gma-MIR5761b


Accession
MI0019718
Description
Glycine max gma-MIR5761b precursor miRNA

Literature search
1 open access papers mention gma-MIR5761b
(1 sentences)

Sequence

guuuuuuuucUUUUGUGUCGUGAAGCUUUUGaugccuaagaacccuagagcaccaauuauuagauguaguauuaguggccaagcacaaaaaaaaaaaaaa
.((((((((.((((((((..((..(((.(((((((((((....................)))).....))))))).))))).)))))))).)))))))).

Structure
g        c        CG  AA   U       -----    gaacccuag 
 uuuuuuuu UUUUGUGU  UG  GCU UUGaugc     cuaa         a
 |||||||| ||||||||  ||  ||| |||||||     ||||          
 aaaaaaaa aaaacacg  ac  cgg gauuaug     gauu         g
a        a        -a  --   u       augua    auuaaccac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 3831731-3831830 [+]

Database links

Mature gma-miR5761b

Accession MIMAT0023173
Description Glycine max gma-miR5761b mature miRNA
Sequence 11 - UUUUGUGUCGUGAAGCUUUUG - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553