miRBase entry: gma-MIR5762

Stem-loop gma-MIR5762


Accession
MI0019703
Description
Glycine max gma-MIR5762 precursor miRNA


Sequence

uguuagaccagucagcugaauccucuuaugaucaagagcuguaaugcauaucaguuuuguuaucaguuugaaccguauuuucuuugaauuaccguaacagcccuucaUCAUAGGAGGAAUCAACUGGCuggucuaaca
(((((((((((((((.(((.((((((((((((.(((.((((((((((...((((..(((....))).))))...))))).................))))).))).)))))))))))).))).)))))))))))))))

Structure
               c   a            c   a     -----------------     aua    uu   u 
uguuagaccagucag uga uccucuuaugau aag gcugu                 aaugc   ucag  uug u
||||||||||||||| ||| |||||||||||| ||| |||||                 |||||   ||||  |||  
acaaucugguCGGUC ACU AGGAGGAUACUa uuc cgaca                 uuaug   aguu  gac a
               A   A            c   c     augccauuaaguuucuu     cca    -u   u 


Annotation confidence Not enough data
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Genome context
chr12: 653862-653999 [+]

Database links

Mature gma-miR5762

Accession MIMAT0023158
Description Glycine max gma-miR5762 mature miRNA
Sequence 108 - UCAUAGGAGGAAUCAACUGGC - 128
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553