miRBase entry: mtr-MIR2593e

Stem-loop mtr-MIR2593e


Accession
MI0019693
Description
Medicago truncatula mtr-MIR2593e precursor miRNA
Gene family
MIPF0000875; MIR2593


Sequence

uuuugacuuuuagauucauucaaucaauaauguauuuggucuauaauauaaaucacAUACAUCAUUGAUUGAAUGAACCUaaaaguuaaa
.((((((((((((.((((((((((((((.((((((.((((.(((...))).)))).)))))).)))))))))))))).))))))))))))

Structure
u            a              a      u    c   a 
 uuugacuuuuag uucauucaaucaau auguau uggu uau  
 |||||||||||| |||||||||||||| |||||| |||| ||| a
 aaauugaaaaUC AAGUAAGUUAGUUA UACAUA acua aua  
-            C              C      c    a   u 


Annotation confidence Not enough data
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Genome context
chr7: 3414785-3414874 [-]

Database links

Mature mtr-miR2593e

Accession MIMAT0023148
Description Medicago truncatula mtr-miR2593e mature miRNA
Sequence 57 - AUACAUCAUUGAUUGAAUGAACCU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553