miRBase entry: mtr-MIR5741a

Stem-loop mtr-MIR5741a


Accession
MI0019663
Description
Medicago truncatula mtr-MIR5741a precursor miRNA
Gene family
MIPF0001392; MIR5741


Sequence

aacucuauaaaauucauuaauuuagucucucugguuaagaucuuaugacuaaauucacagauuucauauacucUAGGGACUAAAUUGAUGGUUUauucaaaaaa
......(((((..(((((((((((((((((..(((..((((((..(((......))).)))))).....)))..))))))))))))))))))))))........

Structure
--aacucu     au                 cu   ---ua      ua   cu 
        auaaa  ucauuaauuuagucucu  ggu     agaucu  uga  a
        |||||  |||||||||||||||||  |||     ||||||  |||   
        uaUUU  GGUAGUUAAAUCAGGGA  uca     uuuaga  acu  a
aaaaaacu     --                 Uc   uauac      -c   ua 


Annotation confidence Not enough data
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Genome context
chr1: 21641192-21641295 [+]

Database links

Mature mtr-miR5741a

Accession MIMAT0023118
Description Medicago truncatula mtr-miR5741a mature miRNA
Sequence 74 - UAGGGACUAAAUUGAUGGUUU - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553