Stem-loop sequence sha-mir-10b

AccessionMI0019626 (change log)
DescriptionSarcophilus harrisii miR-10b stem-loop
Gene family MIPF0000033; mir-10
Literature search

1 open access papers mention sha-mir-10b
(1 sentences)

Stem-loop 
   ------------------------------auaacagaau   a  a     u        a    g     c          ---ug  a 
5'                                         guu uu cguug cuauauau cccu uagaa cgaauuugug     gu u
                                           ||| || ||||| |||||||| |||| ||||| ||||||||||     ||  
3'                                         caa aa guagc gguauaua gggg aucuu gcuuagacac     ca u
   gggucuguaaauauuaaaauugguaaacgucuuuacacuu   a  c     u        a    -     a          ugaua  u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (DEVIL7_0) Overlapping transcripts
GL849635.1: 2022341-2022490 [+]
intergenic
Database links

Mature sequence sha-miR-10b

Accession MIMAT0022799
Sequence

31 -  

uacccuguagaaccgaau

 - 48

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:20044575 "The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer" Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT Science. 327:84-87(2010).