Stem-loop sequence sko-mir-219

Accession

MI0019594 (change log)

Description

Saccoglossus kowalevskii miR-219 stem-loop

Gene family

MIPF0000044; mir-219

Stem-loop

   -gacguc          g  -c    u     aa    a       ---   u 
5'        uuggugacaa cu  ugau gucca  cgca uucuugu   guu u
          |||||||||| ||  |||| |||||  |||| |||||||   ||| c
3'        aacuacuguu ga  acua cgggu  gugu gagaaca   caa u
   aacuaac          -  ac    -     -c    c       aau   u 

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (Skow_1.1; GCA_000003605.1)	Overlapping transcripts
ACQM01084247.1: 297-397 [-]	intergenic
ACQM01084247.1: 903-1003 [-]	intergenic
ACQM01084247.1: 2116-2216 [-]	intergenic
ACQM01084247.1: 5143-5243 [-]	intergenic
ACQM01084247.1: 5951-6051 [-]	intergenic
ACQM01126856.1: 5517-5617 [-]	intergenic

Database links

• miRBase Tracker:MI0019594

Mature sequence sko-miR-219

• Accession: MIMAT0022768
• Sequence: 21 - ugauuguccaaacgcaauucuug - 43
• Evidence: not experimental

References

1. PMID:21210939 "microRNA complements in deuterostomes: origin and evolution of microRNAs" Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M Evol Dev. 13:15-27(2011).