Stem-loop ola-mir-92b

Accession

MI0019516

Description

Oryzias latipes ola-mir-92b precursor miRNA

Gene family

MIPF0000013; mir-25

Literature search

1 open access papers mention ola-mir-92b
(2 sentences)

Sequence

uuccucccgaggucgggcaggugcgggaugcagugcacuguugucguguucccccuccaaUAUUGCACUUGUCCCGGCCUCCCcggcccccggggcuaagaa
....(((((.(((((((.((((.(((((((.((((((.(((((..(........)..))))).))))))))))))))))).)))))))..))))).......

Structure

---uucc     -a       c    g       c      c     uc ugu 
       ucccg  ggucggg aggu cgggaug agugca uguug  g   u
       |||||  ||||||| |||| ||||||| |||||| |||||  |    
       ggggc  ccggcCC UCCG GCCCUGU UCACGU AUaac  c   c
aagaauc     cc       C    -       -      U     cu ccc 

Annotation confidence Not enough data

Genome context

16: 29384732-29384833 [+]

Mature ola-miR-92b

• Accession: MIMAT0022637
• Description: Oryzias latipes ola-miR-92b mature miRNA
• Sequence: 61 - UAUUGCACUUGUCCCGGCCUCCC - 83
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8