miRBase entry: ola-mir-204

Stem-loop ola-mir-204


Accession
MI0019470
Description
Oryzias latipes ola-mir-204 precursor miRNA
Gene family
MIPF0000042; mir-204

Literature search
4 open access papers mention ola-mir-204
(326 sentences)

Sequence

cuuacuaugacauguggacUUCCCUUUGUCAUCCUAUGCcuggaaucaaauaaaagggggcugggaaggcaaagggaugcucagcugucauacaag
.....(((((((..(((.(.((((((((((.(((((.((((................))))))))).)))))))))).).)))..)))))))....

Structure
cuuac       ug   a U          A     U    ggaauca 
     uaugaca  ugg c UCCCUUUGUC UCCUA GCcu       a
     |||||||  ||| | |||||||||| ||||| ||||        
     auacugu  acu g agggaaacgg agggu cggg       a
-gaac       cg   c u          a     -    ggaaaau 


Annotation confidence Not enough data
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Genome context
9: 16361098-16361193 [-]

Database links

Mature ola-miR-204

Accession MIMAT0022589
Description Oryzias latipes ola-miR-204 mature miRNA
Sequence 20 - UUCCCUUUGUCAUCCUAUGC - 39
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21143817
    Discovery and characterization of medaka miRNA genes by next generation sequencing platform
    Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
    BMC Genomics (2010) 11:S8