miRBase entry: ola-mir-26-1

Stem-loop ola-mir-26-1


Accession
MI0019454
Description
Oryzias latipes ola-mir-26-1 precursor miRNA
Gene family
MIPF0000043; mir-26


Sequence

gucucugggccucugccuggUUCAAGUAAUCCAGGAUAGGCugguuaacacuggcacggccuauucuugauuacuuguuucaggaaccggccauaagc
.......((((....(((((..(((((((((.(((((((((((((((....)))).))))))))))).)))))))))..)))))....))))......

Structure
gucucug    ucug     UU         C           -    a 
       ggcc    ccugg  CAAGUAAUC AGGAUAGGCug guua c
       ||||    |||||  ||||||||| ||||||||||| ||||  
       ccgg    ggacu  guucauuag ucuuauccggc cggu a
-cgaaua    ccaa     uu         u           a    c 


Annotation confidence Not enough data
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Genome context
7: 26163773-26163870 [-]

Database links

Mature ola-miR-26

Accession MIMAT0022575
Description Oryzias latipes ola-miR-26 mature miRNA
Sequence 21 - UUCAAGUAAUCCAGGAUAGGC - 41
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 21143817
    Discovery and characterization of medaka miRNA genes by next generation sequencing platform
    Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
    BMC Genomics (2010) 11:S8