Stem-loop ola-mir-499

Accession

MI0019429

Description

Oryzias latipes ola-mir-499 precursor miRNA

Gene family

MIPF0000173; mir-499

Literature search

3 open access papers mention ola-mir-499
(126 sentences)

Sequence

ggacagcuggggcugagacaguuaagacuugcagugauguuuagggcaaugaugacaugAACAUCACUUUAAGUCUGUGCugacucuucucuuuuuc
........((((..(((.((((..(((((((.(((((((((((...((....))...))))))))))).)))))))..)))).)))..)))).....

Structure

ggacagcu    cu   a    ua       c           ggg  a 
        gggg  gag cagu  agacuug agugauguuua   ca u
        ||||  ||| ||||  ||||||| |||||||||||   ||  
        ucuc  cuc guCG  UCUGAAU UCACUACAAgu   gu g
---cuuuu    uu   a    UG       U           aca  a 

Annotation confidence Not enough data

Genome context

5: 26842783-26842879 [-]

Mature ola-miR-499

• Accession: MIMAT0022548
• Description: Oryzias latipes ola-miR-499 mature miRNA
• Sequence: 60 - AACAUCACUUUAAGUCUGUGC - 80
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 21143817
   Discovery and characterization of medaka miRNA genes by next generation sequencing platform
   Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC
   BMC Genomics (2010) 11:S8