miRBase entry: gma-MIR4401b

Stem-loop gma-MIR4401b


Accession
MI0019273
Description
Glycine max gma-MIR4401b precursor miRNA
Gene family
MIPF0001308; MIR4356


Sequence

ugagcaacuuUCAAAGACGUUGCUGAGGUAAgcaccgucuuaguaagcugcugacauucaaagaugguguuuuccucagcaccgucuuugaaauuugcucac
(((((((.(((((((((((.((((((((.((((((((((((((((...)))))........))))))))))).)))))))).))))))))))).))))))).

Structure
-       c           U        U           --------     a 
 ugagcaa uuUCAAAGACG UGCUGAGG AAgcaccgucu        uagua  
 ||||||| ||||||||||| |||||||| |||||||||||        ||||| g
 acucguu aaaguuucugc acgacucc uuugugguaga        gucgu  
c       u           c        u           aacuuaca     c 


Annotation confidence Not enough data
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Genome context
chr10: 14391631-14391732 [+]

Database links

Mature gma-miR4401b

Accession MIMAT0022461
Description Glycine max gma-miR4401b mature miRNA
Sequence 11 - UCAAAGACGUUGCUGAGGUAA - 31
Evidence experimental
Illumina [1], RT-PCR [1]

References

  1. PubMed ID: 21219599
    Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing
    Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS
    BMC Plant Biol (2011) 11:5