Stem-loop gma-MIR5673

Accession

MI0019268

Description

Glycine max gma-MIR5673 precursor miRNA

Sequence

aaucuucuucCGUGGAAUCUCGCGGAAGACAUuacaacuacggaagacagcuucuuccguggaagcucacggaaaaugucuuccgugagauuccacagaagaauauu
....((((((.((((((((((((((((((((((....((((((((((.....))))))))))............)))))))))))))))))))))).))))))....

Structure

aauc      C                      --------acaa          c 
    uucuuc GUGGAAUCUCGCGGAAGACAUu            cuacggaaga a
    |||||| ||||||||||||||||||||||            |||||||||| g
    aagaag caccuuagagugccuucuguaa            ggugccuucu c
uuau      a                      aaggcacucgaa          u 

Annotation confidence Not enough data

Genome context

chr1: 39450461-39450567 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR5673

Mature gma-miR5673

• Accession: MIMAT0022456
• Description: Glycine max gma-miR5673 mature miRNA
• Sequence: 11 - CGUGGAAUCUCGCGGAAGACAU - 32
• Evidence: experimental ; Illumina [1], RT-PCR [1]

References

1. PubMed ID: 21219599
   Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing
   Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS
   BMC Plant Biol (2011) 11:5