Stem-loop ath-MIR5657

Accession

MI0019241

Description

Arabidopsis thaliana ath-MIR5657 precursor miRNA

Sequence

ccaaauacgagucgaacucuuguccugaaguguagaggccuaaaccaguacacaaccaacUGGACAAGGUUAGAUUUGGUGgaaa
(((....((((((.(((.(((((((((..(((((..((......))..)))))...))...)))))))))).)))))).)))...

Structure

---   aaua      g   u       ---  -aa     ga  cc 
   cca    cgaguc aac cuugucc   ug   gugua  gg  u
   |||    |||||| ||| |||||||   ||   |||||  ||   
   gGU    GUUUAG UUG GAACAGG   ac   cacau  cc  a
aaa   ---G      A   -       Uca  caa     ga  aa 

Annotation confidence Not enough data

Genome context

chr5: 9789582-9789666 [+]

Mature ath-miR5657

• Accession: MIMAT0022430
• Description: Arabidopsis thaliana ath-miR5657 mature miRNA
• Sequence: 61 - UGGACAAGGUUAGAUUUGGUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21940835
   High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
   "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
   "Genome Res (2012) 22:163-176