miRBase entry: ath-MIR156j

Stem-loop ath-MIR156j


Accession
MI0019234
Description
Arabidopsis thaliana ath-MIR156j precursor miRNA

Literature search
79 open access papers mention ath-MIR156j
(773 sentences)

Sequence

uuUGACAGAAGAGAGAGAGCACaguuugagucgccaauucccuuguagcucucuaguuuaguguccau
...((((..(((.(((((((((((...((((.....))))..)))).)))))))..)))..))))...

Structure
uuU    GA   -G       -    uuu    c 
   GACA  AGA  AGAGAGC ACag   gagu g
   ||||  |||  ||||||| ||||   |||| c
   cugu  uuu  ucucucg uguu   cuua c
uac    ga   ga       a    -cc    a 


Annotation confidence Not enough data
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Genome context
chr2: 17589020-17589087 [-]

Database links

Mature ath-miR156j

Accession MIMAT0022423
Description Arabidopsis thaliana ath-miR156j mature miRNA
Sequence 3 - UGACAGAAGAGAGAGAGCAC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21940835
    High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
    "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
    "Genome Res (2012) 22:163-176