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miRBase |
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Stem-loop sequence ath-MIR858b |
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Accession | MI0019228 (change log) | |||||
Description | Arabidopsis thaliana miR858b stem-loop | |||||
Gene family | MIPF0001138; MIR858 | |||||
Literature search |
4 open access papers mention ath-MIR858b | |||||
Stem-loop |
ccuac ag uu -a -a caaacauagaggugugaguuugguuugguuuuggguuuugggggguugguaguguuugagguccauaugccucgaucuuccgcuucuauuaauuaauuuucucuauuagaaauauua 5' ccga gguu gg gaguagacaa gaga u |||| |||| || |||||||||| |||| c 3' gguu ucgg cc cuugucuguu uucu u ----c -- uu ag gc auucuaccuuggucuagcccugacgaggaaacuguucacaaacgugacuuaaguuuuugaaacuacccgaauauguauaguaauauauacacguaccaagcuaccucaccuuauuaa |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence ath-miR858b |
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Accession | MIMAT0022417 |
Sequence |
275 - uucguugucuguucgaccuug - 295 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"
Genome Res. 22:163-176(2012).
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