Stem-loop sequence ath-MIR5635a

AccessionMI0019207 (change log)
DescriptionArabidopsis thaliana miR5635a stem-loop
Gene family MIPF0001283; MIR5635
Literature search

1 open access papers mention ath-MIR5635a
(1 sentences)

Stem-loop 
   auuaauuaacaccgagaaaaauguuauuuu                                                  a                                              g        gacccggccaaaucgacucaccauuaacacuucuuaacagcucuccuaacagcguaacuaacaacuguuuuuguccuuaaaccaacaauaacggcuguu 
5'                               auaccugaacuuucaaaaaguggccaaauuaaccgugaauuuuugaaaug ucguuuuauaccucaacaaaaaguugacuucuaauuuaaccuauaa uuaucguu                                                                                                   a
                                 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||                                                                                                    
3'                               uauggacuugaaaguuuuuuaccgguuuaauuggcacuugaaaacuuuac agcaaaauauggaguuguuuuucaacugaagauuaaauuggauauu aauagcaa                                                                                                   g
   ------------------------------                                                  c                                              a        cugaagauuaaacuggauauuaaacagcaacugggccgguuuauaugaguggcaauugugaggaauugucgcaaggauugucggcaauguuuuguaccg
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (TAIR10; GCA_000001735.1) Overlapping transcripts
chr5: 6926005-6926446 [+]
intergenic
Database links

Mature sequence ath-miR5635a

Accession MIMAT0022395
Sequence

268 -  

uguuaaggaguguuaacggug

 - 288

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:21940835 "High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis" Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN Genome Res. 22:163-176(2012).