miRBase entry: mmu-mir-5622

Stem-loop mmu-mir-5622


Accession
MI0019190
Symbol
MGI: Mir5622
Description
Mus musculus mmu-mir-5622 precursor miRNA


Sequence

32 reads, 4 reads per million, 17 experiments
UUCACCACACCCAGCUUAAAGAaaguuuaaaaaauauuCUUAGCUGGGUAGUGGUGGUGC
.(((((((((((((((..(((((.((((...)))).))))))))))))).)))))))...

Structure
--U       -        UA     a    a 
   UCACCAC ACCCAGCU  AAGAa guuu  
   ||||||| ||||||||  ||||| |||| a
   GGUGGUG UGGGUCGA  UUCuu uaaa  
CGU       A        --     a    a 


Annotation confidence Not enough data
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Genome context
chr2: 152865067-152865126 [+]

Database links

Mature mmu-miR-5622-5p

Accession MIMAT0022371
Description Mus musculus mmu-miR-5622-5p mature miRNA
Sequence 1 - UUCACCACACCCAGCUUAAAGA - 22
Evidence not_experimental
Database links
Predicted targets

Mature mmu-miR-5622-3p

Accession MIMAT0022372
Description Mus musculus mmu-miR-5622-3p mature miRNA
Sequence 39 - CUUAGCUGGGUAGUGGUGGUGC - 60
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 21911355
    miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
    "Nucleic Acids Res (2012) 40:37-52